Skip to main content
Back to top
Ctrl
+
K
spatialvi-tools
Search
Ctrl
+
K
Installation
User Guide
Models
ResolVI
DestVI
scVIVA
Background
Variational Inference
Differential Expression
Spatial Transcriptomics Methods
Use Cases
Saving and Loading Models
Training Configuration
Downstream Analysis
API Reference
User API
spatialvi.model.SCVIVA
spatialvi.model.DestVI
spatialvi.model.ResolVI
spatialvi.model.GIMVI
spatialvi.external.RNAStereoscope
spatialvi.external.SpatialStereoscope
spatialvi.settings
Developer API
spatialvi.model.base.SpatialBaseModel
spatialvi.model.base.SpatialNeighborhoodMixin
spatialvi.model.base.SpatialDeconvolutionMixin
spatialvi.model.base.ResolVIPredictiveMixin
spatialvi.data.SpatialCoordsField
spatialvi.data.NeighborhoodGraphField
spatialvi.module.nicheVAE
spatialvi.module.JVAE
Developer Documentation
Contributing Code
Maintenance Guide
Tutorials
ResolVI to address noise and biases in spatial transcriptomics
Multi-resolution deconvolution of spatial transcriptomics
scVIVA for representing cells and their environment in spatial transcriptomics
Introduction to gimVI
Stereoscope applied to left ventricule data
Mapping human lymph node cell types to 10X Visium with Cell2location
Spatial mapping with Tangram
Frequently Asked Questions
References
Repository
Open issue
Search
Error
Please activate JavaScript to enable the search functionality.
Ctrl
+
K